No. words: 1190; after pruning: 1164


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:461)  460  0.00 0.00 0.00  BF474720Ld08P003D04D10F1_063.ab1        1   462 (127)  C BF474720Ld08P003D04D10R1_063.ab1   (139)   462     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BF474720Ld08P003D04D10R1_063.ab1   601 
  155    BF474720Ld08P003D04D10F1_063.ab1    16 
  159  C BF474720Ld08P003D04D10R1_063.ab1   443 
  191    BF474720Ld08P003D04D10F1_063.ab1    52 
  211  C BF474720Ld08P003D04D10R1_063.ab1   391 
  215    BF474720Ld08P003D04D10F1_063.ab1    76 
  223  C BF474720Ld08P003D04D10R1_063.ab1   379 
  239    BF474720Ld08P003D04D10F1_063.ab1   100 
  247  C BF474720Ld08P003D04D10R1_063.ab1   355 
  255    BF474720Ld08P003D04D10F1_063.ab1   116 
  259  C BF474720Ld08P003D04D10R1_063.ab1   343 
  267    BF474720Ld08P003D04D10F1_063.ab1   128 
  275  C BF474720Ld08P003D04D10R1_063.ab1   327 
  303    BF474720Ld08P003D04D10F1_063.ab1   164 
  307  C BF474720Ld08P003D04D10R1_063.ab1   295 
  315    BF474720Ld08P003D04D10F1_063.ab1   176 
  339  C BF474720Ld08P003D04D10R1_063.ab1   263 
  371    BF474720Ld08P003D04D10F1_063.ab1   232 
  375  C BF474720Ld08P003D04D10R1_063.ab1   227 
  399    BF474720Ld08P003D04D10F1_063.ab1   260 
  427  C BF474720Ld08P003D04D10R1_063.ab1   175 
  431    BF474720Ld08P003D04D10F1_063.ab1   292 
  443  C BF474720Ld08P003D04D10R1_063.ab1   159 
  463    BF474720Ld08P003D04D10F1_063.ab1   324 
  467  C BF474720Ld08P003D04D10R1_063.ab1   135 
  471    BF474720Ld08P003D04D10F1_063.ab1   332 
  483  C BF474720Ld08P003D04D10R1_063.ab1   119 
  487    BF474720Ld08P003D04D10F1_063.ab1   348 
  491  C BF474720Ld08P003D04D10R1_063.ab1   111 
  495    BF474720Ld08P003D04D10F1_063.ab1   356 
  563  C BF474720Ld08P003D04D10R1_063.ab1    39 
  571    BF474720Ld08P003D04D10F1_063.ab1   432 
Contig length: old 728, new 728

Contig length: old 728, new 728
New start: 0