No. words: 847; after pruning: 821


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:264)  249  0.00 0.00 0.38  BF474778Ld01P027G02P027G081F1_019.ab1        1   265 (142)  C BF474778Ld01P027G02P027G081R1_019.ab1   (176)   264     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  120 nodes

 62 str. conn. components

Path
    1  C BF474778Ld01P027G02P027G081R1_019.ab1   440 
  238    BF474778Ld01P027G02P027G081F1_019.ab1    62 
  246  C BF474778Ld01P027G02P027G081R1_019.ab1   195 
  282    BF474778Ld01P027G02P027G081F1_019.ab1   106 
  290  C BF474778Ld01P027G02P027G081R1_019.ab1   151 
  306    BF474778Ld01P027G02P027G081F1_019.ab1   130 
Contig length: old 582, new 583

Contig length: old 583, new 583
New start: 0