No. words: 835; after pruning: 809


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 4.4 (1,1:253)  241  0.00 0.00 0.00  BF474778Ld03P027G02P027G081F1_032.ab1        5   254 (141)  C BF474778Ld03P027G02P027G081R1_032.ab1   (190)   250     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C BF474778Ld03P027G02P027G081R1_032.ab1   440 
  238    BF474778Ld03P027G02P027G081F1_032.ab1    52 
  250  C BF474778Ld03P027G02P027G081R1_032.ab1   191 
  282    BF474778Ld03P027G02P027G081F1_032.ab1    96 
  286  C BF474778Ld03P027G02P027G081R1_032.ab1   155 
  346    BF474778Ld03P027G02P027G081F1_032.ab1   160 
  358  C BF474778Ld03P027G02P027G081R1_032.ab1    83 
  362    BF474778Ld03P027G02P027G081F1_032.ab1   176 
Contig length: old 581, new 581

Contig length: old 581, new 581
New start: 0