No. words: 844; after pruning: 818


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:260)  250  0.00 0.00 0.00  BF474778Ld04P027G02P027G081F1_030.ab1        1   261 (153)  C BF474778Ld04P027G02P027G081R1_030.ab1   (169)   261     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C BF474778Ld04P027G02P027G081R1_030.ab1   430 
  204    BF474778Ld04P027G02P027G081F1_030.ab1    35 
  216  C BF474778Ld04P027G02P027G081R1_030.ab1   215 
  228    BF474778Ld04P027G02P027G081F1_030.ab1    59 
  240  C BF474778Ld04P027G02P027G081R1_030.ab1   191 
  296    BF474778Ld04P027G02P027G081F1_030.ab1   127 
  348  C BF474778Ld04P027G02P027G081R1_030.ab1    83 
  352    BF474778Ld04P027G02P027G081F1_030.ab1   183 
Contig length: old 583, new 583

Contig length: old 583, new 583
New start: 0