No. words: 846; after pruning: 820


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:263)  252  0.00 0.00 0.00  BF474778Ld09P027G02P027G081F1_020.ab1        1   264 (143)  C BF474778Ld09P027G02P027G081R1_020.ab1   (175)   264     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C BF474778Ld09P027G02P027G081R1_020.ab1   439 
  237    BF474778Ld09P027G02P027G081F1_020.ab1    62 
  245  C BF474778Ld09P027G02P027G081R1_020.ab1   195 
  305    BF474778Ld09P027G02P027G081F1_020.ab1   130 
  333  C BF474778Ld09P027G02P027G081R1_020.ab1   107 
  337    BF474778Ld09P027G02P027G081F1_020.ab1   162 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0