No. words: 1196; after pruning: 1170


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:434)  420  0.00 0.00 0.46  BF478499Ld01P078G05P078G111F1_024.ab1        1   435 (145)  C BF478499Ld01P078G05P078G111R1_024.ab1   (183)   433     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C BF478499Ld01P078G05P078G111R1_024.ab1   616 
  210    BF478499Ld01P078G05P078G111F1_024.ab1    27 
  214  C BF478499Ld01P078G05P078G111R1_024.ab1   403 
  378    BF478499Ld01P078G05P078G111F1_024.ab1   196 
  382  C BF478499Ld01P078G05P078G111R1_024.ab1   235 
  494    BF478499Ld01P078G05P078G111F1_024.ab1   312 
Contig length: old 761, new 762

Contig length: old 762, new 762
New start: 0