No. words: 1439; after pruning: 1413


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:822)  609  0.16 0.00 0.00  BF478559At02P078H05P078H111F1_018.ab1      133   748 (0)  C BF478559At02P078H05P078H111R1_018.ab1   (0)   691    76 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    BF478559At02P078H05P078H111F1_018.ab1     1 
  493  C BF478559At02P078H05P078H111R1_018.ab1   331 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0