No. words: 1283; after pruning: 1257


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:840)  406  2.49 0.00 0.00  BF478559Ld01P078H05P078H111F1_035.ab1      278   719 (0)  C BF478559Ld01P078H05P078H111R1_035.ab1   (0)   564   123 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1    BF478559Ld01P078H05P078H111F1_035.ab1     1 
  620  C BF478559Ld01P078H05P078H111R1_035.ab1   222 
  624    BF478559Ld01P078H05P078H111F1_035.ab1   624 
  636  C BF478559Ld01P078H05P078H111R1_035.ab1   206 
  644    BF478559Ld01P078H05P078H111F1_035.ab1   644 
  652  C BF478559Ld01P078H05P078H111R1_035.ab1   190 
Contig length: old 841, new 841

Contig length: old 841, new 841
New start: 0