No. words: 987; after pruning: 961


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.9 (1,1:837)  113  6.04 0.00 0.67  BF478559Ld03P078H05P078H111F1_048.ab1      567   715 (0)  C BF478559Ld03P078H05P078H111R1_048.ab1   (0)   272   125 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  54 nodes

 29 str. conn. components

Path
    1    BF478559Ld03P078H05P078H111F1_048.ab1     1 
  637  C BF478559Ld03P078H05P078H111R1_048.ab1   202 
  641    BF478559Ld03P078H05P078H111F1_048.ab1   641 
  645  C BF478559Ld03P078H05P078H111R1_048.ab1   194 
  664    BF478559Ld03P078H05P078H111F1_048.ab1   664 
  668  C BF478559Ld03P078H05P078H111R1_048.ab1   171 
Contig length: old 838, new 838

Contig length: old 838, new 838
New start: 0