No. words: 234; after pruning: 208


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.3 -0.3 (1,1:56)   48  0.00 3.57 0.00  BF478742Ta17P078A06P101E101F1_031.ab1        1    56 (64)  C BF478742Ta17P078A06P101E101R1_031.ab1   (56)    58     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.3       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  24 nodes

 14 str. conn. components

Path
    1  C BF478742Ta17P078A06P101E101R1_031.ab1   114 
   73    BF478742Ta17P078A06P101E101F1_031.ab1    15 
  105  C BF478742Ta17P078A06P101E101R1_031.ab1    10 
  109    BF478742Ta17P078A06P101E101F1_031.ab1    51 
Contig length: old 177, new 178

Contig length: old 178, new 177
New start: 0 
D Change at: 70; seg lengths: entry 0, contig 1