No. words: 1713; after pruning: 1687


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.1 (1,1:838)  828  0.12 0.00 0.12  BF482385As01P027H02P027H081F1_027.ab1        1   839 (30)  C BF482385As01P027H02P027H081R1_027.ab1   (6)   838     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  416 nodes

 210 str. conn. components

Path
    1  C BF482385As01P027H02P027H081R1_027.ab1   844 
   18    BF482385As01P027H02P027H081F1_027.ab1    12 
  563  C BF482385As01P027H02P027H081R1_027.ab1   282 
  567    BF482385As01P027H02P027H081F1_027.ab1   561 
  591  C BF482385As01P027H02P027H081R1_027.ab1   254 
  827    BF482385As01P027H02P027H081F1_027.ab1   821 
Contig length: old 874, new 875

Contig length: old 875, new 875
New start: 0