No. words: 1720; after pruning: 1680


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.3 (1,1:828)  819  0.24 0.12 0.00  BF482385As02P027H02P027H081F1_025.ab1        1   829 (37)  C BF482385As02P027H02P027H081R1_025.ab1   (24)   830     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BF482385As02P027H02P027H081R1_025.ab1   854 
   40    BF482385As02P027H02P027H081F1_025.ab1    15 
   60  C BF482385As02P027H02P027H081R1_025.ab1   795 
   64    BF482385As02P027H02P027H081F1_025.ab1    39 
  581  C BF482385As02P027H02P027H081R1_025.ab1   274 
  589    BF482385As02P027H02P027H081F1_025.ab1   564 
  609  C BF482385As02P027H02P027H081R1_025.ab1   246 
  849    BF482385As02P027H02P027H081F1_025.ab1   824 
Contig length: old 891, new 891

Contig length: old 891, new 891
New start: 0