No. words: 1816; after pruning: 1790


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.6 (1,1:818)  811  0.00 0.12 0.00  BF482385Ld05P027H02P027H081F1_067.ab1        1   818 (46)  C BF482385Ld05P027H02P027H081R1_067.ab1   (133)   819     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1  C BF482385Ld05P027H02P027H081R1_067.ab1   952 
  137    BF482385Ld05P027H02P027H081F1_067.ab1     4 
  577  C BF482385Ld05P027H02P027H081R1_067.ab1   376 
  693    BF482385Ld05P027H02P027H081F1_067.ab1   560 
  705  C BF482385Ld05P027H02P027H081R1_067.ab1   248 
  709    BF482385Ld05P027H02P027H081F1_067.ab1   576 
  729  C BF482385Ld05P027H02P027H081R1_067.ab1   224 
  809    BF482385Ld05P027H02P027H081F1_067.ab1   676 
  813  C BF482385Ld05P027H02P027H081R1_067.ab1   140 
  946    BF482385Ld05P027H02P027H081F1_067.ab1   812 
Contig length: old 997, new 998

Contig length: old 998, new 998
New start: 0