No. words: 1762; after pruning: 1736


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:819)  817  0.00 0.00 0.00  BF482385Ld08P027H02P027H081F1_078.ab1        1   820 (100)  C BF482385Ld08P027H02P027H081R1_078.ab1   (22)   820     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  412 nodes

 208 str. conn. components

Path
    1  C BF482385Ld08P027H02P027H081R1_078.ab1   842 
   26    BF482385Ld08P027H02P027H081F1_078.ab1     4 
  446  C BF482385Ld08P027H02P027H081R1_078.ab1   397 
  466    BF482385Ld08P027H02P027H081F1_078.ab1   444 
  470  C BF482385Ld08P027H02P027H081R1_078.ab1   373 
  582    BF482385Ld08P027H02P027H081F1_078.ab1   560 
  654  C BF482385Ld08P027H02P027H081R1_078.ab1   189 
  698    BF482385Ld08P027H02P027H081F1_078.ab1   676 
  702  C BF482385Ld08P027H02P027H081R1_078.ab1   141 
  838    BF482385Ld08P027H02P027H081F1_078.ab1   816 
Contig length: old 942, new 942

Contig length: old 942, new 942
New start: 0