No. words: 1820; after pruning: 1794


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:818)  816  0.00 0.00 0.00  BF482385Ld10P027H02P027H081F1_074.ab1        1   819 (106)  C BF482385Ld10P027H02P027H081R1_074.ab1   (76)   819     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  412 nodes

 208 str. conn. components

Path
    1  C BF482385Ld10P027H02P027H081R1_074.ab1   895 
   80    BF482385Ld10P027H02P027H081F1_074.ab1     4 
  184  C BF482385Ld10P027H02P027H081R1_074.ab1   712 
  188    BF482385Ld10P027H02P027H081F1_074.ab1   112 
  708  C BF482385Ld10P027H02P027H081R1_074.ab1   188 
  748    BF482385Ld10P027H02P027H081F1_074.ab1   672 
  752  C BF482385Ld10P027H02P027H081R1_074.ab1   144 
  892    BF482385Ld10P027H02P027H081F1_074.ab1   816 
Contig length: old 1001, new 1001

Contig length: old 1001, new 1001
New start: 0