No. words: 1723; after pruning: 1683


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:824)  813  0.24 0.00 0.12  BF482385Tu02P027H02P027H081F1_029.ab1        1   825 (35)  C BF482385Tu02P027H02P027H081R1_029.ab1   (39)   824     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1  C BF482385Tu02P027H02P027H081R1_029.ab1   863 
   51    BF482385Tu02P027H02P027H081F1_029.ab1    12 
  626  C BF482385Tu02P027H02P027H081R1_029.ab1   238 
  842    BF482385Tu02P027H02P027H081F1_029.ab1   803 
  846  C BF482385Tu02P027H02P027H081R1_029.ab1    18 
  854    BF482385Tu02P027H02P027H081F1_029.ab1   815 
Contig length: old 898, new 899

Contig length: old 899, new 899
New start: 0