No. words: 1799; after pruning: 1759


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:1302)  486  0.40 0.00 0.00  BF482436Ld07P078B06P078B121F1_019.ab1      416   911 (0)  C BF482436Ld07P078B06P078B121R1_019.ab1   (0)   888   393 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    BF482436Ld07P078B06P078B121F1_019.ab1     1 
  587  C BF482436Ld07P078B06P078B121R1_019.ab1   717 
  595    BF482436Ld07P078B06P078B121F1_019.ab1   595 
  599  C BF482436Ld07P078B06P078B121R1_019.ab1   705 
  635    BF482436Ld07P078B06P078B121F1_019.ab1   635 
  643  C BF482436Ld07P078B06P078B121R1_019.ab1   661 
Contig length: old 1303, new 1303

Contig length: old 1303, new 1303
New start: 0