No. words: 1756; after pruning: 1730


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:1312)  423  0.45 0.23 0.23  BF482436Ld08P078B06P078B121F1_017.ab1      423   865 (0)  C BF482436Ld08P078B06P078B121R1_017.ab1   (0)   891   449 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1    BF482436Ld08P078B06P078B121F1_017.ab1     1 
  646  C BF482436Ld08P078B06P078B121R1_017.ab1   668 
  654    BF482436Ld08P078B06P078B121F1_017.ab1   654 
  658  C BF482436Ld08P078B06P078B121R1_017.ab1   656 
Contig length: old 1313, new 1313

Contig length: old 1313, new 1313
New start: 0