No. words: 1792; after pruning: 1766


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:1323)  456  0.00 0.21 0.21  BF482436Ld09P078B06P078B121F1_032.ab1      430   897 (0)  C BF482436Ld09P078B06P078B121R1_032.ab1   (0)   895   428 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1    BF482436Ld09P078B06P078B121F1_032.ab1     1 
  624  C BF482436Ld09P078B06P078B121R1_032.ab1   701 
  636    BF482436Ld09P078B06P078B121F1_032.ab1   636 
  664  C BF482436Ld09P078B06P078B121R1_032.ab1   661 
Contig length: old 1324, new 1324

Contig length: old 1324, new 1324
New start: 0