No. words: 1151; after pruning: 1125


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.9 (1,1:410)  399  0.00 0.00 0.00  BF482462Ld02P078C06P078C121F1_053.ab1        5   411 (150)  C BF482462Ld02P078C06P078C121R1_053.ab1   (183)   407     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BF482462Ld02P078C06P078C121R1_053.ab1   590 
  427    BF482462Ld02P078C06P078C121F1_053.ab1   248 
Contig length: old 740, new 740

Contig length: old 740, new 740
New start: 0