No. words: 1152; after pruning: 1126


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.8 (1,1:412)  396  0.00 0.00 0.24  BF482462Ld07P078C06P078C121F1_060.ab1        5   413 (149)  C BF482462Ld07P078C06P078C121R1_060.ab1   (182)   408     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BF482462Ld07P078C06P078C121R1_060.ab1   590 
  278    BF482462Ld07P078C06P078C121F1_060.ab1   100 
  286  C BF482462Ld07P078C06P078C121R1_060.ab1   305 
  302    BF482462Ld07P078C06P078C121F1_060.ab1   124 
  318  C BF482462Ld07P078C06P078C121R1_060.ab1   273 
  446    BF482462Ld07P078C06P078C121F1_060.ab1   268 
Contig length: old 739, new 740

Contig length: old 740, new 740
New start: 0