No. words: 1162; after pruning: 1136


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.3 (1,1:416)  406  0.00 0.00 0.00  BF482462Ld08P078C06P078C121F1_058.ab1        3   417 (149)  C BF482462Ld08P078C06P078C121R1_058.ab1   (181)   415     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C BF482462Ld08P078C06P078C121R1_058.ab1   596 
  297    BF482462Ld08P078C06P078C121F1_058.ab1   118 
  517  C BF482462Ld08P078C06P078C121R1_058.ab1    80 
  553    BF482462Ld08P078C06P078C121F1_058.ab1   374 
Contig length: old 745, new 745

Contig length: old 745, new 745
New start: 0