No. words: 1030; after pruning: 1004


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:354)  348  0.00 0.00 0.00  BF482491Ld06P078D06P078D121F1_073.ab1        1   355 (148)  C BF482491Ld06P078D06P078D121R1_073.ab1   (172)   355     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C BF482491Ld06P078D06P078D121R1_073.ab1   527 
  320    BF482491Ld06P078D06P078D121F1_073.ab1   148 
  340  C BF482491Ld06P078D06P078D121R1_073.ab1   188 
  348    BF482491Ld06P078D06P078D121F1_073.ab1   176 
  428  C BF482491Ld06P078D06P078D121R1_073.ab1   100 
  432    BF482491Ld06P078D06P078D121F1_073.ab1   260 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0