No. words: 1026; after pruning: 1000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:339)  328  0.00 0.00 0.29  BF482491Ld07P078D06P078D121F1_071.ab1        1   340 (162)  C BF482491Ld07P078D06P078D121R1_071.ab1   (185)   339     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C BF482491Ld07P078D06P078D121R1_071.ab1   524 
  257    BF482491Ld07P078D06P078D121F1_071.ab1    72 
  261  C BF482491Ld07P078D06P078D121R1_071.ab1   264 
  393    BF482491Ld07P078D06P078D121F1_071.ab1   208 
  401  C BF482491Ld07P078D06P078D121R1_071.ab1   124 
  405    BF482491Ld07P078D06P078D121F1_071.ab1   220 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0