No. words: 1023; after pruning: 997


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:464)  461  0.00 0.00 0.00  BF482939As01P081E01P081E071F1_032.ab1        1   465 (50)  C BF482939As01P081E01P081E071R1_032.ab1   (43)   465     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF482939As01P081E01P081E071R1_032.ab1   508 
   67    BF482939As01P081E01P081E071F1_032.ab1    24 
   71  C BF482939As01P081E01P081E071R1_032.ab1   438 
   91    BF482939As01P081E01P081E071F1_032.ab1    48 
   95  C BF482939As01P081E01P081E071R1_032.ab1   414 
  115    BF482939As01P081E01P081E071F1_032.ab1    72 
  119  C BF482939As01P081E01P081E071R1_032.ab1   390 
  151    BF482939As01P081E01P081E071F1_032.ab1   108 
  159  C BF482939As01P081E01P081E071R1_032.ab1   350 
  167    BF482939As01P081E01P081E071F1_032.ab1   124 
  203  C BF482939As01P081E01P081E071R1_032.ab1   306 
  207    BF482939As01P081E01P081E071F1_032.ab1   164 
  235  C BF482939As01P081E01P081E071R1_032.ab1   274 
  259    BF482939As01P081E01P081E071F1_032.ab1   216 
  263  C BF482939As01P081E01P081E071R1_032.ab1   246 
  275    BF482939As01P081E01P081E071F1_032.ab1   232 
  291  C BF482939As01P081E01P081E071R1_032.ab1   218 
  339    BF482939As01P081E01P081E071F1_032.ab1   296 
  343  C BF482939As01P081E01P081E071R1_032.ab1   166 
  351    BF482939As01P081E01P081E071F1_032.ab1   308 
  363  C BF482939As01P081E01P081E071R1_032.ab1   146 
  407    BF482939As01P081E01P081E071F1_032.ab1   364 
  427  C BF482939As01P081E01P081E071R1_032.ab1    82 
  431    BF482939As01P081E01P081E071F1_032.ab1   388 
  463  C BF482939As01P081E01P081E071R1_032.ab1    46 
  483    BF482939As01P081E01P081E071F1_032.ab1   440 
  491  C BF482939As01P081E01P081E071R1_032.ab1    18 
  495    BF482939As01P081E01P081E071F1_032.ab1   452 
Contig length: old 558, new 558

Contig length: old 558, new 558
New start: 0