No. words: 1019; after pruning: 993


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:461)  453  0.00 0.00 0.22  BF482939At01P081E01P081E071F1_028.ab1        1   462 (50)  C BF482939At01P081E01P081E071R1_028.ab1   (46)   461     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BF482939At01P081E01P081E071R1_028.ab1   507 
   90    BF482939At01P081E01P081E071F1_028.ab1    44 
   98  C BF482939At01P081E01P081E071R1_028.ab1   410 
  114    BF482939At01P081E01P081E071F1_028.ab1    68 
  122  C BF482939At01P081E01P081E071R1_028.ab1   386 
  162    BF482939At01P081E01P081E071F1_028.ab1   116 
  202  C BF482939At01P081E01P081E071R1_028.ab1   306 
  258    BF482939At01P081E01P081E071F1_028.ab1   212 
  266  C BF482939At01P081E01P081E071R1_028.ab1   242 
  274    BF482939At01P081E01P081E071F1_028.ab1   228 
  286  C BF482939At01P081E01P081E071R1_028.ab1   222 
  346    BF482939At01P081E01P081E071F1_028.ab1   300 
  362  C BF482939At01P081E01P081E071R1_028.ab1   146 
  394    BF482939At01P081E01P081E071F1_028.ab1   348 
  402  C BF482939At01P081E01P081E071R1_028.ab1   106 
  418    BF482939At01P081E01P081E071F1_028.ab1   372 
  426  C BF482939At01P081E01P081E071R1_028.ab1    82 
  430    BF482939At01P081E01P081E071F1_028.ab1   384 
Contig length: old 557, new 558

Contig length: old 558, new 558
New start: 0