No. words: 1016; after pruning: 990


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:461)  449  0.00 0.22 0.22  BF482939At02P081E01P081E071F1_026.ab1        1   462 (49)  C BF482939At02P081E01P081E071R1_026.ab1   (43)   462     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BF482939At02P081E01P081E071R1_026.ab1   505 
  112    BF482939At02P081E01P081E071F1_026.ab1    68 
  120  C BF482939At02P081E01P081E071R1_026.ab1   386 
  148    BF482939At02P081E01P081E071F1_026.ab1   104 
  156  C BF482939At02P081E01P081E071R1_026.ab1   350 
  160    BF482939At02P081E01P081E071F1_026.ab1   116 
  200  C BF482939At02P081E01P081E071R1_026.ab1   306 
  208    BF482939At02P081E01P081E071F1_026.ab1   164 
  232  C BF482939At02P081E01P081E071R1_026.ab1   274 
  252    BF482939At02P081E01P081E071F1_026.ab1   208 
  260  C BF482939At02P081E01P081E071R1_026.ab1   246 
  272    BF482939At02P081E01P081E071F1_026.ab1   228 
  280  C BF482939At02P081E01P081E071R1_026.ab1   226 
  368    BF482939At02P081E01P081E071F1_026.ab1   324 
  388  C BF482939At02P081E01P081E071R1_026.ab1   118 
  392    BF482939At02P081E01P081E071F1_026.ab1   348 
  400  C BF482939At02P081E01P081E071R1_026.ab1   106 
  408    BF482939At02P081E01P081E071F1_026.ab1   364 
  424  C BF482939At02P081E01P081E071R1_026.ab1    82 
  432    BF482939At02P081E01P081E071F1_026.ab1   388 
  448  C BF482939At02P081E01P081E071R1_026.ab1    58 
  452    BF482939At02P081E01P081E071F1_026.ab1   408 
  468  C BF482939At02P081E01P081E071R1_026.ab1    38 
  476    BF482939At02P081E01P081E071F1_026.ab1   432 
  484  C BF482939At02P081E01P081E071R1_026.ab1    22 
  488    BF482939At02P081E01P081E071F1_026.ab1   444 
Contig length: old 554, new 555

Contig length: old 555, new 555
New start: 0