No. words: 1270; after pruning: 1244


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:476)  474  0.00 0.00 0.00  BF482939Ld02P081E01P081E071F1_066.ab1        1   477 (169)  C BF482939Ld02P081E01P081E071R1_066.ab1   (147)   477     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BF482939Ld02P081E01P081E071R1_066.ab1   624 
  223    BF482939Ld02P081E01P081E071F1_066.ab1    76 
  227  C BF482939Ld02P081E01P081E071R1_066.ab1   398 
  431    BF482939Ld02P081E01P081E071F1_066.ab1   284 
  439  C BF482939Ld02P081E01P081E071R1_066.ab1   186 
  475    BF482939Ld02P081E01P081E071F1_066.ab1   328 
  507  C BF482939Ld02P081E01P081E071R1_066.ab1   118 
  535    BF482939Ld02P081E01P081E071F1_066.ab1   388 
  567  C BF482939Ld02P081E01P081E071R1_066.ab1    58 
  583    BF482939Ld02P081E01P081E071F1_066.ab1   436 
Contig length: old 793, new 793

Contig length: old 793, new 793
New start: 0