No. words: 1225; after pruning: 1199


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:476)  474  0.00 0.00 0.00  BF482939Ld04P081E01P081E071F1_093.ab1        1   477 (144)  C BF482939Ld04P081E01P081E071R1_093.ab1   (127)   477     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BF482939Ld04P081E01P081E071R1_093.ab1   604 
  423    BF482939Ld04P081E01P081E071F1_093.ab1   296 
  427  C BF482939Ld04P081E01P081E071R1_093.ab1   178 
  455    BF482939Ld04P081E01P081E071F1_093.ab1   328 
  519  C BF482939Ld04P081E01P081E071R1_093.ab1    86 
  531    BF482939Ld04P081E01P081E071F1_093.ab1   404 
  551  C BF482939Ld04P081E01P081E071R1_093.ab1    54 
  559    BF482939Ld04P081E01P081E071F1_093.ab1   432 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0