No. words: 1269; after pruning: 1243


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:477)  475  0.00 0.00 0.00  BF482939Ld05P081E01P081E071F1_091.ab1        1   478 (169)  C BF482939Ld05P081E01P081E071R1_091.ab1   (144)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BF482939Ld05P081E01P081E071R1_091.ab1   622 
  468    BF482939Ld05P081E01P081E071F1_091.ab1   324 
  472  C BF482939Ld05P081E01P081E071R1_091.ab1   151 
  532    BF482939Ld05P081E01P081E071F1_091.ab1   388 
  572  C BF482939Ld05P081E01P081E071R1_091.ab1    51 
  576    BF482939Ld05P081E01P081E071F1_091.ab1   432 
Contig length: old 791, new 791

Contig length: old 791, new 791
New start: 0