No. words: 1263; after pruning: 1237


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:473)  460  0.42 0.00 0.21  BF482939Ld08P081E01P081E071F1_020.ab1        1   474 (170)  C BF482939Ld08P081E01P081E071R1_020.ab1   (146)   473     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BF482939Ld08P081E01P081E071R1_020.ab1   619 
  466    BF482939Ld08P081E01P081E071F1_020.ab1   320 
  502  C BF482939Ld08P081E01P081E071R1_020.ab1   118 
  522    BF482939Ld08P081E01P081E071F1_020.ab1   376 
Contig length: old 789, new 790

Contig length: old 790, new 790
New start: 0