No. words: 1736; after pruning: 1640


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:931)  787  0.75 0.00 0.12  BF482977At01P027A03P027A091F1_087.ab1       33   836 (0)  C BF482977At01P027A03P027A091R1_087.ab1   (0)   900    98 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1    BF482977At01P027A03P027A091F1_087.ab1     1 
  590  C BF482977At01P027A03P027A091R1_087.ab1   344 
Contig length: old 932, new 933

Contig length: old 933, new 933
New start: 0