No. words: 1799; after pruning: 1745


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.8 (1,1:930)  818  0.24 0.12 0.12  BF482977At02P027A03P027A091F1_085.ab1        1   834 (0)  C BF482977At02P027A03P027A091R1_085.ab1   (34)   931    98 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BF482977At02P027A03P027A091R1_085.ab1   965 
   44    BF482977At02P027A03P027A091F1_085.ab1     9 
  431  C BF482977At02P027A03P027A091R1_085.ab1   536 
Contig length: old 965, new 966

Contig length: old 966, new 965
New start: 0 
D Change at: 42; seg lengths: entry 0, contig 1