No. words: 1651; after pruning: 1625


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:907)  740  0.00 0.00 0.00  BF482977Ld03P027A03P027A091F1_068.ab1       63   805 (0)  C BF482977Ld03P027A03P027A091R1_068.ab1   (0)   846   104 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    BF482977Ld03P027A03P027A091F1_068.ab1     1 
  378  C BF482977Ld03P027A03P027A091R1_068.ab1   531 
  382    BF482977Ld03P027A03P027A091F1_068.ab1   382 
  394  C BF482977Ld03P027A03P027A091R1_068.ab1   515 
  402    BF482977Ld03P027A03P027A091F1_068.ab1   402 
  406  C BF482977Ld03P027A03P027A091R1_068.ab1   503 
  422    BF482977Ld03P027A03P027A091F1_068.ab1   422 
  430  C BF482977Ld03P027A03P027A091R1_068.ab1   479 
  438    BF482977Ld03P027A03P027A091F1_068.ab1   438 
  442  C BF482977Ld03P027A03P027A091R1_068.ab1   467 
  446    BF482977Ld03P027A03P027A091F1_068.ab1   446 
  450  C BF482977Ld03P027A03P027A091R1_068.ab1   459 
  454    BF482977Ld03P027A03P027A091F1_068.ab1   454 
  462  C BF482977Ld03P027A03P027A091R1_068.ab1   447 
  506    BF482977Ld03P027A03P027A091F1_068.ab1   506 
  514  C BF482977Ld03P027A03P027A091R1_068.ab1   395 
  610    BF482977Ld03P027A03P027A091F1_068.ab1   610 
  614  C BF482977Ld03P027A03P027A091R1_068.ab1   295 
Contig length: old 908, new 908

Contig length: old 908, new 908
New start: 0