No. words: 1915; after pruning: 1861


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.4 (1,1:921)  900  0.22 0.22 0.11  BF482977Ld05P027A03P027A091F1_095.ab1        1   922 (58)  C BF482977Ld05P027A03P027A091R1_095.ab1   (12)   923     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  450 nodes

 227 str. conn. components

Path
    1  C BF482977Ld05P027A03P027A091R1_095.ab1   935 
   23    BF482977Ld05P027A03P027A091F1_095.ab1    10 
  550  C BF482977Ld05P027A03P027A091R1_095.ab1   386 
  927    BF482977Ld05P027A03P027A091F1_095.ab1   913 
Contig length: old 993, new 994

Contig length: old 994, new 994
New start: 0