No. words: 1744; after pruning: 1718


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.1 (1,1:919)  816  0.12 0.00 0.00  BF482977Ld10P027A03P027A091F1_085.ab1       33   856 (0)  C BF482977Ld10P027A03P027A091R1_085.ab1   (0)   888    65 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1    BF482977Ld10P027A03P027A091F1_085.ab1     1 
  256  C BF482977Ld10P027A03P027A091R1_085.ab1   665 
  260    BF482977Ld10P027A03P027A091F1_085.ab1   260 
  268  C BF482977Ld10P027A03P027A091R1_085.ab1   653 
  272    BF482977Ld10P027A03P027A091F1_085.ab1   272 
  284  C BF482977Ld10P027A03P027A091R1_085.ab1   637 
  296    BF482977Ld10P027A03P027A091F1_085.ab1   296 
  300  C BF482977Ld10P027A03P027A091R1_085.ab1   621 
  320    BF482977Ld10P027A03P027A091F1_085.ab1   320 
  324  C BF482977Ld10P027A03P027A091R1_085.ab1   597 
  408    BF482977Ld10P027A03P027A091F1_085.ab1   408 
  412  C BF482977Ld10P027A03P027A091R1_085.ab1   509 
Contig length: old 920, new 920

Contig length: old 920, new 920
New start: 0