No. words: 1383; after pruning: 1357


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:638)  618  0.63 0.00 0.16  BF482977Sn25P088H09P095B121F1_033.ab1        1   639 (60)  C BF482977Sn25P088H09P095B121R1_033.ab1   (46)   638     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C BF482977Sn25P088H09P095B121R1_033.ab1   684 
   58    BF482977Sn25P088H09P095B121F1_033.ab1    12 
   62  C BF482977Sn25P088H09P095B121R1_033.ab1   623 
   74    BF482977Sn25P088H09P095B121F1_033.ab1    28 
   86  C BF482977Sn25P088H09P095B121R1_033.ab1   599 
   90    BF482977Sn25P088H09P095B121F1_033.ab1    44 
  106  C BF482977Sn25P088H09P095B121R1_033.ab1   579 
  114    BF482977Sn25P088H09P095B121F1_033.ab1    68 
  138  C BF482977Sn25P088H09P095B121R1_033.ab1   547 
  230    BF482977Sn25P088H09P095B121F1_033.ab1   184 
Contig length: old 744, new 745

Contig length: old 745, new 745
New start: 0