No. words: 1608; after pruning: 1582


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:783)  766  0.38 0.00 0.13  BF482977Sn26P052D09P027A091F1_030.ab1        1   785 (39)  C BF482977Sn26P052D09P027A091R1_030.ab1   (0)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    BF482977Sn26P052D09P027A091F1_030.ab1     1 
  551  C BF482977Sn26P052D09P027A091R1_030.ab1   234 
  575    BF482977Sn26P052D09P027A091F1_030.ab1   575 
  587  C BF482977Sn26P052D09P027A091R1_030.ab1   198 
  591    BF482977Sn26P052D09P027A091F1_030.ab1   591 
  639  C BF482977Sn26P052D09P027A091R1_030.ab1   146 
  643    BF482977Sn26P052D09P027A091F1_030.ab1   643 
  663  C BF482977Sn26P052D09P027A091R1_030.ab1   122 
  699    BF482977Sn26P052D09P027A091F1_030.ab1   699 
  707  C BF482977Sn26P052D09P027A091R1_030.ab1    78 
  731    BF482977Sn26P052D09P027A091F1_030.ab1   731 
  745  C BF482977Sn26P052D09P027A091R1_030.ab1    41 
  777    BF482977Sn26P052D09P027A091F1_030.ab1   777 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0