No. words: 1671; after pruning: 1645


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.5 (1,1:789)  780  0.13 0.00 0.00  BF482977Sn26P088F09P095B121F1_056.ab1        1   786 (46)  C BF482977Sn26P088F09P095B121R1_056.ab1   (49)   790     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF482977Sn26P088F09P095B121R1_056.ab1   839 
   53    BF482977Sn26P088F09P095B121F1_056.ab1     4 
   57  C BF482977Sn26P088F09P095B121R1_056.ab1   783 
   75    BF482977Sn26P088F09P095B121F1_056.ab1    26 
   79  C BF482977Sn26P088F09P095B121R1_056.ab1   761 
   87    BF482977Sn26P088F09P095B121F1_056.ab1    38 
  159  C BF482977Sn26P088F09P095B121R1_056.ab1   681 
  163    BF482977Sn26P088F09P095B121F1_056.ab1   114 
  167  C BF482977Sn26P088F09P095B121R1_056.ab1   673 
  183    BF482977Sn26P088F09P095B121F1_056.ab1   134 
  255  C BF482977Sn26P088F09P095B121R1_056.ab1   585 
  291    BF482977Sn26P088F09P095B121F1_056.ab1   242 
  603  C BF482977Sn26P088F09P095B121R1_056.ab1   237 
  675    BF482977Sn26P088F09P095B121F1_056.ab1   626 
  687  C BF482977Sn26P088F09P095B121R1_056.ab1   153 
  703    BF482977Sn26P088F09P095B121F1_056.ab1   654 
  723  C BF482977Sn26P088F09P095B121R1_056.ab1   117 
  755    BF482977Sn26P088F09P095B121F1_056.ab1   706 
  759  C BF482977Sn26P088F09P095B121R1_056.ab1    81 
  803    BF482977Sn26P088F09P095B121F1_056.ab1   754 
Contig length: old 881, new 881

Contig length: old 881, new 881
New start: 0