No. words: 1662; after pruning: 1636


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:778)  770  0.26 0.00 0.00  BF482977Sn27P088F09P095B121F1_053.ab1        1   779 (59)  C BF482977Sn27P088F09P095B121R1_053.ab1   (45)   779     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BF482977Sn27P088F09P095B121R1_053.ab1   824 
   51    BF482977Sn27P088F09P095B121F1_053.ab1     6 
   59  C BF482977Sn27P088F09P095B121R1_053.ab1   766 
   96    BF482977Sn27P088F09P095B121F1_053.ab1    51 
  116  C BF482977Sn27P088F09P095B121R1_053.ab1   709 
  124    BF482977Sn27P088F09P095B121F1_053.ab1    79 
  156  C BF482977Sn27P088F09P095B121R1_053.ab1   669 
  172    BF482977Sn27P088F09P095B121F1_053.ab1   127 
  252  C BF482977Sn27P088F09P095B121R1_053.ab1   573 
  296    BF482977Sn27P088F09P095B121F1_053.ab1   251 
  324  C BF482977Sn27P088F09P095B121R1_053.ab1   501 
  332    BF482977Sn27P088F09P095B121F1_053.ab1   287 
  336  C BF482977Sn27P088F09P095B121R1_053.ab1   489 
  468    BF482977Sn27P088F09P095B121F1_053.ab1   423 
  476  C BF482977Sn27P088F09P095B121R1_053.ab1   349 
  700    BF482977Sn27P088F09P095B121F1_053.ab1   655 
  724  C BF482977Sn27P088F09P095B121R1_053.ab1   101 
  780    BF482977Sn27P088F09P095B121F1_053.ab1   735 
  784  C BF482977Sn27P088F09P095B121R1_053.ab1    41 
  800    BF482977Sn27P088F09P095B121F1_053.ab1   755 
  804  C BF482977Sn27P088F09P095B121R1_053.ab1    21 
  816    BF482977Sn27P088F09P095B121F1_053.ab1   771 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0