No. words: 1627; after pruning: 1587


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:783)  775  0.26 0.00 0.00  BF482977Sn29P052D09P027A091F1_024.ab1        1   784 (39)  C BF482977Sn29P052D09P027A091R1_024.ab1   (20)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C BF482977Sn29P052D09P027A091R1_024.ab1   804 
   32    BF482977Sn29P052D09P027A091F1_024.ab1    12 
  118  C BF482977Sn29P052D09P027A091R1_024.ab1   687 
  122    BF482977Sn29P052D09P027A091F1_024.ab1   102 
  618  C BF482977Sn29P052D09P027A091R1_024.ab1   187 
  626    BF482977Sn29P052D09P027A091F1_024.ab1   606 
  702  C BF482977Sn29P052D09P027A091R1_024.ab1   103 
  714    BF482977Sn29P052D09P027A091F1_024.ab1   694 
  726  C BF482977Sn29P052D09P027A091R1_024.ab1    79 
  790    BF482977Sn29P052D09P027A091F1_024.ab1   770 
  794  C BF482977Sn29P052D09P027A091R1_024.ab1    11 
  798    BF482977Sn29P052D09P027A091F1_024.ab1   778 
Contig length: old 843, new 843

Contig length: old 843, new 843
New start: 0