No. words: 1392; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:650)  642  0.00 0.00 0.15  BF482977Sn29P088H09P095B121F1_061.ab1        1   651 (42)  C BF482977Sn29P088H09P095B121R1_061.ab1   (49)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BF482977Sn29P088H09P095B121R1_061.ab1   699 
   77    BF482977Sn29P088H09P095B121F1_061.ab1    28 
  105  C BF482977Sn29P088H09P095B121R1_061.ab1   595 
  117    BF482977Sn29P088H09P095B121F1_061.ab1    68 
  141  C BF482977Sn29P088H09P095B121R1_061.ab1   559 
  549    BF482977Sn29P088H09P095B121F1_061.ab1   500 
Contig length: old 741, new 742

Contig length: old 742, new 742
New start: 0