No. words: 1379; after pruning: 1353


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:644)  641  0.00 0.00 0.00  BF482977Sn30P088H09P095B121F1_055.ab1        1   645 (46)  C BF482977Sn30P088H09P095B121R1_055.ab1   (43)   645     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BF482977Sn30P088H09P095B121R1_055.ab1   688 
   63    BF482977Sn30P088H09P095B121F1_055.ab1    20 
   67  C BF482977Sn30P088H09P095B121R1_055.ab1   622 
   71    BF482977Sn30P088H09P095B121F1_055.ab1    28 
   79  C BF482977Sn30P088H09P095B121R1_055.ab1   610 
   83    BF482977Sn30P088H09P095B121F1_055.ab1    40 
  103  C BF482977Sn30P088H09P095B121R1_055.ab1   586 
  111    BF482977Sn30P088H09P095B121F1_055.ab1    68 
  119  C BF482977Sn30P088H09P095B121R1_055.ab1   570 
  123    BF482977Sn30P088H09P095B121F1_055.ab1    80 
  139  C BF482977Sn30P088H09P095B121R1_055.ab1   550 
  307    BF482977Sn30P088H09P095B121F1_055.ab1   264 
  643  C BF482977Sn30P088H09P095B121R1_055.ab1    46 
  647    BF482977Sn30P088H09P095B121F1_055.ab1   604 
  651  C BF482977Sn30P088H09P095B121R1_055.ab1    38 
  659    BF482977Sn30P088H09P095B121F1_055.ab1   616 
  663  C BF482977Sn30P088H09P095B121R1_055.ab1    26 
  671    BF482977Sn30P088H09P095B121F1_055.ab1   628 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0