No. words: 1678; after pruning: 1652


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.8 (1,1:785)  774  0.13 0.13 0.00  BF482977Sn31P088F09P095B121F1_049.ab1        1   784 (54)  C BF482977Sn31P088F09P095B121R1_049.ab1   (54)   786     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C BF482977Sn31P088F09P095B121R1_049.ab1   840 
   74    BF482977Sn31P088F09P095B121F1_049.ab1    19 
   86  C BF482977Sn31P088F09P095B121R1_049.ab1   755 
   90    BF482977Sn31P088F09P095B121F1_049.ab1    35 
  154  C BF482977Sn31P088F09P095B121R1_049.ab1   687 
  170    BF482977Sn31P088F09P095B121F1_049.ab1   115 
  174  C BF482977Sn31P088F09P095B121R1_049.ab1   667 
  178    BF482977Sn31P088F09P095B121F1_049.ab1   123 
  290  C BF482977Sn31P088F09P095B121R1_049.ab1   551 
  298    BF482977Sn31P088F09P095B121F1_049.ab1   243 
  326  C BF482977Sn31P088F09P095B121R1_049.ab1   515 
  570    BF482977Sn31P088F09P095B121F1_049.ab1   515 
  614  C BF482977Sn31P088F09P095B121R1_049.ab1   227 
  646    BF482977Sn31P088F09P095B121F1_049.ab1   591 
  670  C BF482977Sn31P088F09P095B121R1_049.ab1   171 
  830    BF482977Sn31P088F09P095B121F1_049.ab1   775 
Contig length: old 892, new 893

Contig length: old 893, new 893
New start: 0 
S Change at: 58; seg lengths: entry 1, contig 1