No. words: 1325; after pruning: 1299


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.8 (1,1:605)  596  0.00 0.00 0.17  BF482977Sn32P088G09P095B121F2_039.ab1        1   605 (63)  C BF482977Sn32P088G09P095B121R2_039.ab1   (52)   605     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BF482977Sn32P088G09P095B121R2_039.ab1   657 
  512    BF482977Sn32P088G09P095B121F2_039.ab1   460 
  623  C BF482977Sn32P088G09P095B121R2_039.ab1    36 
  631    BF482977Sn32P088G09P095B121F2_039.ab1   579 
Contig length: old 719, new 720

Contig length: old 720, new 720
New start: 0