No. words: 1664; after pruning: 1624


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:783)  780  0.13 0.00 0.00  BF482977Ta11P088F09P095B121F1_037.ab1        1   784 (47)  C BF482977Ta11P088F09P095B121R1_037.ab1   (49)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF482977Ta11P088F09P095B121R1_037.ab1   833 
   53    BF482977Ta11P088F09P095B121F1_037.ab1     4 
  305  C BF482977Ta11P088F09P095B121R1_037.ab1   529 
  569    BF482977Ta11P088F09P095B121F1_037.ab1   520 
  609  C BF482977Ta11P088F09P095B121R1_037.ab1   225 
  613    BF482977Ta11P088F09P095B121F1_037.ab1   564 
  669  C BF482977Ta11P088F09P095B121R1_037.ab1   165 
  677    BF482977Ta11P088F09P095B121F1_037.ab1   628 
  685  C BF482977Ta11P088F09P095B121R1_037.ab1   149 
  721    BF482977Ta11P088F09P095B121F1_037.ab1   672 
  725  C BF482977Ta11P088F09P095B121R1_037.ab1   109 
  825    BF482977Ta11P088F09P095B121F1_037.ab1   776 
Contig length: old 880, new 880

Contig length: old 880, new 880
New start: 0