No. words: 1390; after pruning: 1364


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:644)  641  0.00 0.00 0.00  BF482977Ta11P088H09P095B121F1_047.ab1        1   645 (52)  C BF482977Ta11P088H09P095B121R1_047.ab1   (48)   645     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BF482977Ta11P088H09P095B121R1_047.ab1   693 
   76    BF482977Ta11P088H09P095B121F1_047.ab1    28 
   84  C BF482977Ta11P088H09P095B121R1_047.ab1   610 
   96    BF482977Ta11P088H09P095B121F1_047.ab1    48 
  108  C BF482977Ta11P088H09P095B121R1_047.ab1   586 
  116    BF482977Ta11P088H09P095B121F1_047.ab1    68 
  124  C BF482977Ta11P088H09P095B121R1_047.ab1   570 
  140    BF482977Ta11P088H09P095B121F1_047.ab1    92 
  152  C BF482977Ta11P088H09P095B121R1_047.ab1   542 
  160    BF482977Ta11P088H09P095B121F1_047.ab1   112 
  188  C BF482977Ta11P088H09P095B121R1_047.ab1   506 
  212    BF482977Ta11P088H09P095B121F1_047.ab1   164 
  240  C BF482977Ta11P088H09P095B121R1_047.ab1   454 
  248    BF482977Ta11P088H09P095B121F1_047.ab1   200 
  256  C BF482977Ta11P088H09P095B121R1_047.ab1   438 
  264    BF482977Ta11P088H09P095B121F1_047.ab1   216 
  276  C BF482977Ta11P088H09P095B121R1_047.ab1   418 
  280    BF482977Ta11P088H09P095B121F1_047.ab1   232 
  364  C BF482977Ta11P088H09P095B121R1_047.ab1   330 
  400    BF482977Ta11P088H09P095B121F1_047.ab1   352 
  404  C BF482977Ta11P088H09P095B121R1_047.ab1   290 
  412    BF482977Ta11P088H09P095B121F1_047.ab1   364 
  460  C BF482977Ta11P088H09P095B121R1_047.ab1   234 
  476    BF482977Ta11P088H09P095B121F1_047.ab1   428 
  500  C BF482977Ta11P088H09P095B121R1_047.ab1   194 
  536    BF482977Ta11P088H09P095B121F1_047.ab1   488 
  576  C BF482977Ta11P088H09P095B121R1_047.ab1   118 
  584    BF482977Ta11P088H09P095B121F1_047.ab1   536 
  592  C BF482977Ta11P088H09P095B121R1_047.ab1   102 
  600    BF482977Ta11P088H09P095B121F1_047.ab1   552 
  616  C BF482977Ta11P088H09P095B121R1_047.ab1    78 
  624    BF482977Ta11P088H09P095B121F1_047.ab1   576 
  644  C BF482977Ta11P088H09P095B121R1_047.ab1    50 
  652    BF482977Ta11P088H09P095B121F1_047.ab1   604 
  660  C BF482977Ta11P088H09P095B121R1_047.ab1    34 
  676    BF482977Ta11P088H09P095B121F1_047.ab1   628 
Contig length: old 745, new 745

Contig length: old 745, new 745
New start: 0