No. words: 1671; after pruning: 1645


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:784)  776  0.25 0.00 0.00  BF482977Ta12P088F09P095B121F1_038.ab1        1   785 (51)  C BF482977Ta12P088F09P095B121R1_038.ab1   (50)   785     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BF482977Ta12P088F09P095B121R1_038.ab1   835 
   54    BF482977Ta12P088F09P095B121F1_038.ab1     4 
   62  C BF482977Ta12P088F09P095B121R1_038.ab1   774 
   66    BF482977Ta12P088F09P095B121F1_038.ab1    16 
   74  C BF482977Ta12P088F09P095B121R1_038.ab1   762 
   92    BF482977Ta12P088F09P095B121F1_038.ab1    42 
  168  C BF482977Ta12P088F09P095B121R1_038.ab1   668 
  172    BF482977Ta12P088F09P095B121F1_038.ab1   122 
  184  C BF482977Ta12P088F09P095B121R1_038.ab1   652 
  188    BF482977Ta12P088F09P095B121F1_038.ab1   138 
  272  C BF482977Ta12P088F09P095B121R1_038.ab1   564 
  412    BF482977Ta12P088F09P095B121F1_038.ab1   362 
  420  C BF482977Ta12P088F09P095B121R1_038.ab1   416 
  460    BF482977Ta12P088F09P095B121F1_038.ab1   410 
  464  C BF482977Ta12P088F09P095B121R1_038.ab1   372 
  744    BF482977Ta12P088F09P095B121F1_038.ab1   694 
  748  C BF482977Ta12P088F09P095B121R1_038.ab1    88 
  832    BF482977Ta12P088F09P095B121F1_038.ab1   782 
Contig length: old 886, new 886

Contig length: old 886, new 886
New start: 0