No. words: 1371; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:644)  636  0.00 0.00 0.16  BF482977Ta13P088H09P095B121F1_045.ab1        1   645 (49)  C BF482977Ta13P088H09P095B121R1_045.ab1   (33)   644     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BF482977Ta13P088H09P095B121R1_045.ab1   677 
   53    BF482977Ta13P088H09P095B121F1_045.ab1    20 
   57  C BF482977Ta13P088H09P095B121R1_045.ab1   621 
   73    BF482977Ta13P088H09P095B121F1_045.ab1    40 
   89  C BF482977Ta13P088H09P095B121R1_045.ab1   589 
  101    BF482977Ta13P088H09P095B121F1_045.ab1    68 
  125  C BF482977Ta13P088H09P095B121R1_045.ab1   553 
  545    BF482977Ta13P088H09P095B121F1_045.ab1   512 
  625  C BF482977Ta13P088H09P095B121R1_045.ab1    53 
  637    BF482977Ta13P088H09P095B121F1_045.ab1   604 
  653  C BF482977Ta13P088H09P095B121R1_045.ab1    26 
  661    BF482977Ta13P088H09P095B121F1_045.ab1   628 
Contig length: old 726, new 727

Contig length: old 727, new 727
New start: 0