No. words: 1561; after pruning: 1535


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:777)  731  0.00 0.00 0.00  BF482977Ta14P052D09P027A091F1_006.ab1       44   778 (48)  C BF482977Ta14P052D09P027A091R1_006.ab1   (0)   735     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1    BF482977Ta14P052D09P027A091F1_006.ab1     1 
   95  C BF482977Ta14P052D09P027A091R1_006.ab1   684 
  103    BF482977Ta14P052D09P027A091F1_006.ab1   103 
  675  C BF482977Ta14P052D09P027A091R1_006.ab1   104 
  699    BF482977Ta14P052D09P027A091F1_006.ab1   699 
  707  C BF482977Ta14P052D09P027A091R1_006.ab1    72 
  739    BF482977Ta14P052D09P027A091F1_006.ab1   739 
  743  C BF482977Ta14P052D09P027A091R1_006.ab1    36 
  763    BF482977Ta14P052D09P027A091F1_006.ab1   763 
  767  C BF482977Ta14P052D09P027A091R1_006.ab1    12 
  775    BF482977Ta14P052D09P027A091F1_006.ab1   775 
Contig length: old 826, new 826

Contig length: old 826, new 826
New start: 0